Identification of a novel ovine LH-beta promoter region, which dramatically enhances its promoter activity
Identifieur interne : 000294 ( Main/Exploration ); précédent : 000293; suivant : 000295Identification of a novel ovine LH-beta promoter region, which dramatically enhances its promoter activity
Auteurs : Redouane Aherrahrou [Allemagne, Maroc] ; Zouhair Aherrahrou [Allemagne] ; Jeanette Erdmann [Allemagne] ; Mohieddine Moumni [Maroc]Source :
- SpringerPlus [ 2193-1801 ] ; 2015.
Abstract
The luteinizing hormone beta subunit (
The online version of this article (doi:10.1186/s40064-015-1182-5) contains supplementary material, which is available to authorized users.
Url:
DOI: 10.1186/s40064-015-1182-5
PubMed: 26355566
PubMed Central: 4554545
Affiliations:
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<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Identification of a novel ovine LH-beta promoter region, which dramatically enhances its promoter activity</title><author><name sortKey="Aherrahrou, Redouane" sort="Aherrahrou, Redouane" uniqKey="Aherrahrou R" first="Redouane" last="Aherrahrou">Redouane Aherrahrou</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck</wicri:regionArea></affiliation><affiliation wicri:level="1"><nlm:aff id="Aff2">Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes, Morocco</nlm:aff><country xml:lang="fr">Maroc</country><wicri:regionArea>Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes</wicri:regionArea></affiliation></author><author><name sortKey="Aherrahrou, Zouhair" sort="Aherrahrou, Zouhair" uniqKey="Aherrahrou Z" first="Zouhair" last="Aherrahrou">Zouhair Aherrahrou</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck</wicri:regionArea></affiliation></author><author><name sortKey="Erdmann, Jeanette" sort="Erdmann, Jeanette" uniqKey="Erdmann J" first="Jeanette" last="Erdmann">Jeanette Erdmann</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck</wicri:regionArea></affiliation></author><author><name sortKey="Moumni, Mohieddine" sort="Moumni, Mohieddine" uniqKey="Moumni M" first="Mohieddine" last="Moumni">Mohieddine Moumni</name><affiliation wicri:level="1"><nlm:aff id="Aff2">Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes, Morocco</nlm:aff><country xml:lang="fr">Maroc</country><wicri:regionArea>Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">26355566</idno><idno type="pmc">4554545</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4554545</idno><idno type="RBID">PMC:4554545</idno><idno 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id="Aff2">Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes, Morocco</nlm:aff><country xml:lang="fr">Maroc</country><wicri:regionArea>Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes</wicri:regionArea></affiliation></author><author><name sortKey="Aherrahrou, Zouhair" sort="Aherrahrou, Zouhair" uniqKey="Aherrahrou Z" first="Zouhair" last="Aherrahrou">Zouhair Aherrahrou</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck</wicri:regionArea></affiliation></author><author><name sortKey="Erdmann, Jeanette" sort="Erdmann, Jeanette" uniqKey="Erdmann J" first="Jeanette" last="Erdmann">Jeanette Erdmann</name><affiliation wicri:level="1"><nlm:aff id="Aff1">Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Institute for Integrative and Experimental Genomics (IIEG), Luebeck University, Luebeck, Maria-Goeppert-Str. 1, 23562 Lübeck</wicri:regionArea></affiliation></author><author><name sortKey="Moumni, Mohieddine" sort="Moumni, Mohieddine" uniqKey="Moumni M" first="Mohieddine" last="Moumni">Mohieddine Moumni</name><affiliation wicri:level="1"><nlm:aff id="Aff2">Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes, Morocco</nlm:aff><country xml:lang="fr">Maroc</country><wicri:regionArea>Department of Biology, Faculty of Sciences, Moulay Ismail University, Zitoune, BP 11201, 50000 Meknes</wicri:regionArea></affiliation></author></analytic><series><title level="j">SpringerPlus</title><idno type="eISSN">2193-1801</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The luteinizing hormone beta subunit (<italic>LH</italic>-<italic>beta</italic>) gene plays a critical role in reproduction. In order to characterize and analyze the promoter region of LH-beta in sheep, a genomic library was constructed in phage lambda <italic>gt</italic> 10 and screened. A novel region of 1,224 bp upstream from the targeted LH-beta gene was identified. Blasting this sequence showed a perfect homology for the first 721 bp sequence with an upstream ovine LH-beta sequence in the database. However, the remaining 5′-503 bp showed no sequence matching. DNA from Moroccan breeds was isolated and the whole region was amplified and confirmed by sequencing. To further confirm the promoter activity of this region, an in vitro analysis using a luciferase assay was carried out. An increase in the promoter activity of the whole region was demonstrated compared to the empty vector. More interestingly, the unpublished region significantly enhanced the promoter activity compared to the known region alone. To predict putative transcription factor binding-sites (TFBSs), an in silico analysis was performed using the TFSEARCH program. The region features many TFBSs and contains two palindrome sequences of 17- and 18-bp. Taken together, a novel region was identified and confirmed in sheep which contained a promoter activity rich with binding sites for a putative regulatory element as shown in silico.</p><sec><title>Electronic supplementary material</title><p>The online version of this article (doi:10.1186/s40064-015-1182-5) contains supplementary material, which is available to authorized users.</p></sec></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Alevizaki, M" uniqKey="Alevizaki M">M Alevizaki</name></author><author><name sortKey="Huhtaniemi, I" uniqKey="Huhtaniemi I">I Huhtaniemi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Aumais, Jp" uniqKey="Aumais J">JP Aumais</name></author><author><name sortKey="Lee, Hs" uniqKey="Lee H">HS Lee</name></author><author><name sortKey="Degannes, C" uniqKey="Degannes C">C DeGannes</name></author><author><name sortKey="Horsford, J" uniqKey="Horsford J">J 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Reader</name></author><author><name sortKey="Haydon, Lj" uniqKey="Haydon L">LJ Haydon</name></author><author><name sortKey="Littlejohn, Rp" uniqKey="Littlejohn R">RP Littlejohn</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Ruoss, C" uniqKey="Ruoss C">C Ruoss</name></author><author><name sortKey="Tadros, A" uniqKey="Tadros A">A Tadros</name></author><author><name sortKey="O Hea, T" uniqKey="O Hea T">T O’Shea</name></author><author><name sortKey="Mcfarlane, J" uniqKey="Mcfarlane J">J McFarlane</name></author><author><name sortKey="Almahbobi, G" uniqKey="Almahbobi G">G Almahbobi</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Sairam, Mr" uniqKey="Sairam M">MR Sairam</name></author><author><name sortKey="Li, Ch" uniqKey="Li C">CH Li</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Souza, Cjh" uniqKey="Souza C">CJH Souza</name></author><author><name sortKey="Baird, Dt" uniqKey="Baird D">DT Baird</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Souza, Cj" uniqKey="Souza C">CJ Souza</name></author><author><name sortKey="Macdougall, C" uniqKey="Macdougall C">C MacDougall</name></author><author><name sortKey="Macdougall, C" uniqKey="Macdougall C">C MacDougall</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Tremblay, Jj" uniqKey="Tremblay J">JJ Tremblay</name></author><author><name sortKey="Drouin, J" uniqKey="Drouin J">J Drouin</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Viger, Rs" uniqKey="Viger R">RS Viger</name></author><author><name sortKey="Taniguchi, H" uniqKey="Taniguchi H">H Taniguchi</name></author><author><name sortKey="Robert, Nm" uniqKey="Robert N">NM Robert</name></author><author><name sortKey="Tremblay, Jj" uniqKey="Tremblay J">JJ Tremblay</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Walsh, He" uniqKey="Walsh H">HE Walsh</name></author><author><name sortKey="Shupnik, Ma" uniqKey="Shupnik M">MA Shupnik</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wilson, T" uniqKey="Wilson T">T Wilson</name></author><author><name sortKey="Wu, X Y" uniqKey="Wu X">X-Y Wu</name></author><author><name sortKey="Juengel, Jl" uniqKey="Juengel J">JL Juengel</name></author><author><name sortKey="Ross, Ik" uniqKey="Ross I">IK Ross</name></author><author><name sortKey="Lumsden, Jm" uniqKey="Lumsden J">JM Lumsden</name></author><author><name sortKey="Lord, Ea" uniqKey="Lord E">EA Lord</name></author><author><name sortKey="Dodds, Kg" uniqKey="Dodds K">KG Dodds</name></author><author><name sortKey="Walling, Ga" uniqKey="Walling G">GA Walling</name></author><author><name sortKey="Mcewan, Jc" uniqKey="Mcewan J">JC McEwan</name></author><author><name sortKey="O Onnell, Ar" uniqKey="O Onnell A">AR O’Connell</name></author><author><name sortKey="Mcnatty, Kp" uniqKey="Mcnatty K">KP McNatty</name></author><author><name sortKey="Montgomery, Gw" uniqKey="Montgomery G">GW Montgomery</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Allemagne</li><li>Maroc</li></country></list><tree><country name="Allemagne"><noRegion><name sortKey="Aherrahrou, Redouane" sort="Aherrahrou, Redouane" uniqKey="Aherrahrou R" first="Redouane" last="Aherrahrou">Redouane Aherrahrou</name></noRegion><name sortKey="Aherrahrou, Zouhair" sort="Aherrahrou, Zouhair" uniqKey="Aherrahrou Z" first="Zouhair" last="Aherrahrou">Zouhair Aherrahrou</name><name sortKey="Erdmann, Jeanette" sort="Erdmann, Jeanette" uniqKey="Erdmann J" first="Jeanette" last="Erdmann">Jeanette Erdmann</name></country><country name="Maroc"><noRegion><name sortKey="Aherrahrou, Redouane" sort="Aherrahrou, Redouane" uniqKey="Aherrahrou R" first="Redouane" last="Aherrahrou">Redouane Aherrahrou</name></noRegion><name sortKey="Moumni, Mohieddine" sort="Moumni, Mohieddine" uniqKey="Moumni M" first="Mohieddine" last="Moumni">Mohieddine Moumni</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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